Detailed information of deep learning profile BP000037.1

This page shows detailed deep learning-derived predictions and motifs for REST in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000037.1
Cell line/tissue: Ishikawa
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BUU
Model: BPNet

Contribution weight matrix (CWM)

A [ 8.78e-04 -5.87e-04 -5.42e-04 -1.78e-05 1.01e-04 1.15e-01 -5.03e-05 1.18e-01 -1.67e-05 -1.63e-03 7.07e-04 3.02e-04 -6.58e-04 ]
C [ 8.76e-04 3.11e-02 1.15e-03 2.30e-06 7.78e-05 2.30e-04 1.09e-01 3.34e-04 -6.00e-06 5.62e-02 -2.77e-04 4.62e-02 5.35e-02 ]
G [ 3.39e-02 -5.28e-04 -5.89e-04 1.57e-01 1.43e-01 -8.89e-05 -2.64e-04 -1.07e-06 1.58e-01 -9.47e-04 1.97e-02 8.11e-04 -3.03e-04 ]
T [ -1.68e-03 3.57e-03 5.95e-02 1.97e-06 5.76e-05 -2.25e-05 -7.80e-06 -4.29e-05 2.17e-05 7.85e-04 2.02e-02 -1.16e-03 5.52e-04 ]

Frequency matrix

A [ 1302 2140 1058 117 359 8283 144 8738 99 1276 1971 1270 998 ]
C [ 3739 3451 837 10 18 466 7969 179 32 5834 277 5593 6235 ]
G [ 2895 1294 777 8958 8704 77 671 62 8977 627 3255 1629 337 ]
T [ 1178 2229 6442 29 33 288 330 135 6 1377 3611 622 1543 ]

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages