Detailed information of deep learning profile BP000037.1

This page shows detailed deep learning-derived predictions and motifs for REST in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000037.1
Cell line/tissue: Ishikawa
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BUU
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.52e-04 -1.16e-03 2.02e-02 7.85e-04 2.17e-05 -4.29e-05 -7.80e-06 -2.25e-05 5.76e-05 1.97e-06 5.95e-02 3.57e-03 -1.68e-03 ]
C [ -3.03e-04 8.11e-04 1.97e-02 -9.47e-04 1.58e-01 -1.07e-06 -2.64e-04 -8.89e-05 1.43e-01 1.57e-01 -5.89e-04 -5.28e-04 3.39e-02 ]
G [ 5.35e-02 4.62e-02 -2.77e-04 5.62e-02 -6.00e-06 3.34e-04 1.09e-01 2.30e-04 7.78e-05 2.30e-06 1.15e-03 3.11e-02 8.76e-04 ]
T [ -6.58e-04 3.02e-04 7.07e-04 -1.63e-03 -1.67e-05 1.18e-01 -5.03e-05 1.15e-01 1.01e-04 -1.78e-05 -5.42e-04 -5.87e-04 8.78e-04 ]

Frequency matrix

A [ 1543 622 3611 1377 6 135 330 288 33 29 6442 2229 1178 ]
C [ 337 1629 3255 627 8977 62 671 77 8704 8958 777 1294 2895 ]
G [ 6235 5593 277 5834 32 179 7969 466 18 10 837 3451 3739 ]
T [ 998 1270 1971 1276 99 8738 144 8283 359 117 1058 2140 1302 ]

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages