Detailed information of deep learning profile BP000037.1

This page shows detailed deep learning-derived predictions and motifs for REST in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000037.1
Cell line/tissue: Ishikawa
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BUU
Model: BPNet

Contribution weight matrix (CWM)

A [ 8.78e-04 -5.87e-04 -5.42e-04 -1.78e-05 1.01e-04 1.15e-01 -5.03e-05 1.18e-01 -1.67e-05 -1.63e-03 7.07e-04 3.02e-04 -6.58e-04 ]
C [ 8.76e-04 3.11e-02 1.15e-03 2.30e-06 7.78e-05 2.30e-04 1.09e-01 3.34e-04 -6.00e-06 5.62e-02 -2.77e-04 4.62e-02 5.35e-02 ]
G [ 3.39e-02 -5.28e-04 -5.89e-04 1.57e-01 1.43e-01 -8.89e-05 -2.64e-04 -1.07e-06 1.58e-01 -9.47e-04 1.97e-02 8.11e-04 -3.03e-04 ]
T [ -1.68e-03 3.57e-03 5.95e-02 1.97e-06 5.76e-05 -2.25e-05 -7.80e-06 -4.29e-05 2.17e-05 7.85e-04 2.02e-02 -1.16e-03 5.52e-04 ]

Frequency matrix

A [ 1302 2140 1058 117 359 8283 144 8738 99 1276 1971 1270 998 ]
C [ 3739 3451 837 10 18 466 7969 179 32 5834 277 5593 6235 ]
G [ 2895 1294 777 8958 8704 77 671 62 8977 627 3255 1629 337 ]
T [ 1178 2229 6442 29 33 288 330 135 6 1377 3611 622 1543 ]

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages