Detailed information of deep learning profile BP000047.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000047.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000EUM
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.49e-04 3.18e-02 2.49e-02 6.23e-03 5.25e-02 -1.60e-05 4.66e-07 1.03e-05 5.29e-05 -1.64e-03 -3.70e-04 -4.50e-04 ]
C [ 8.15e-03 -1.16e-04 -3.82e-05 -3.44e-04 -8.18e-06 6.44e-05 -8.59e-06 -1.98e-05 3.41e-02 1.90e-04 -1.12e-03 1.49e-02 ]
G [ -8.98e-04 5.70e-04 -2.68e-04 8.09e-04 1.68e-05 -7.12e-06 5.25e-02 4.63e-02 -1.01e-04 7.20e-03 1.40e-02 -6.28e-04 ]
T [ 5.40e-04 -9.26e-05 3.92e-04 -5.06e-04 3.72e-06 5.06e-02 -8.26e-06 -1.05e-04 -1.41e-04 2.26e-04 -4.37e-04 -1.33e-04 ]

Frequency matrix

A [ 1182 3893 3803 2436 4951 25 17 259 903 927 929 1144 ]
C [ 2018 256 400 894 11 54 22 29 3452 758 645 2548 ]
G [ 704 701 259 1374 56 11 4963 4537 88 1748 2436 436 ]
T [ 1140 194 582 340 26 4954 42 219 601 1611 1034 916 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000031.1 YY1 ENCSR000BSM SK-N-SH Homo sapiens
BP000033.1 YY1 ENCSR000BSY Ishikawa Homo sapiens
BP000051.1 YY1 ENCSR000EWF K562 Homo sapiens
BP000054.1 YY1 ENCSR000EXG NT2/D1 Homo sapiens
BP000112.1 YY1 ENCSR382MOM liver Homo sapiens
BP000176.1 YY1 ENCSR859RAO HEK293 Homo sapiens
BP000190.1 YY1 ENCSR994YLZ liver Homo sapiens
Showing 7 profiles of page 2 from 2 pages