Detailed information of deep learning profile BP000047.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000047.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000EUM
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.49e-04 3.18e-02 2.49e-02 6.23e-03 5.25e-02 -1.60e-05 4.66e-07 1.03e-05 5.29e-05 -1.64e-03 -3.70e-04 -4.50e-04 ]
C [ 8.15e-03 -1.16e-04 -3.82e-05 -3.44e-04 -8.18e-06 6.44e-05 -8.59e-06 -1.98e-05 3.41e-02 1.90e-04 -1.12e-03 1.49e-02 ]
G [ -8.98e-04 5.70e-04 -2.68e-04 8.09e-04 1.68e-05 -7.12e-06 5.25e-02 4.63e-02 -1.01e-04 7.20e-03 1.40e-02 -6.28e-04 ]
T [ 5.40e-04 -9.26e-05 3.92e-04 -5.06e-04 3.72e-06 5.06e-02 -8.26e-06 -1.05e-04 -1.41e-04 2.26e-04 -4.37e-04 -1.33e-04 ]

Frequency matrix

A [ 1182 3893 3803 2436 4951 25 17 259 903 927 929 1144 ]
C [ 2018 256 400 894 11 54 22 29 3452 758 645 2548 ]
G [ 704 701 259 1374 56 11 4963 4537 88 1748 2436 436 ]
T [ 1140 194 582 340 26 4954 42 219 601 1611 1034 916 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000009.1 YY1 ENCSR000BKD H1 Homo sapiens
BP000011.1 YY1 ENCSR000BKJ GM12891 Homo sapiens
BP000013.1 YY1 ENCSR000BKU K562 Homo sapiens
BP000014.1 YY1 ENCSR000BLT GM12892 Homo sapiens
BP000015.1 YY1 ENCSR000BLZ SK-N-SH Homo sapiens
BP000016.1 YY1 ENCSR000BMH K562 Homo sapiens
BP000020.1 YY1 ENCSR000BNP GM12878 Homo sapiens
BP000021.1 YY1 ENCSR000BNT HepG2 Homo sapiens
BP000022.1 YY1 ENCSR000BNX HCT116 Homo sapiens
BP000028.1 YY1 ENCSR000BPM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages