Detailed information of deep learning profile BP000054.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in NT2/D1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000054.1
Cell line/tissue: NT2/D1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000EXG
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.61e-03 -1.17e-03 -3.05e-03 -6.36e-04 -2.18e-04 6.30e-06 1.34e-01 -3.18e-05 -3.60e-04 1.97e-03 -3.93e-04 ]
C [ -8.80e-04 3.51e-02 3.27e-02 -3.08e-05 9.76e-02 9.68e-02 -2.34e-05 5.37e-05 -1.88e-03 -7.36e-04 3.24e-03 ]
G [ 3.76e-02 -5.54e-05 2.40e-03 9.34e-02 2.47e-05 2.40e-05 9.97e-05 2.41e-05 -8.10e-04 6.56e-04 -2.93e-04 ]
T [ -1.36e-03 -2.56e-03 -2.40e-03 -7.27e-04 -3.04e-05 -2.85e-05 -2.00e-05 1.42e-01 7.61e-03 3.37e-02 5.08e-02 ]

Frequency matrix

A [ 809 932 1597 380 156 123 7842 3 536 1070 471 ]
C [ 957 5007 4238 51 7613 7682 7 8 2376 695 2030 ]
G [ 4882 1211 1421 6732 61 61 22 2 2111 1383 631 ]
T [ 1257 754 649 742 75 39 34 7892 2882 4757 4773 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000031.1 YY1 ENCSR000BSM SK-N-SH Homo sapiens
BP000033.1 YY1 ENCSR000BSY Ishikawa Homo sapiens
BP000047.1 YY1 ENCSR000EUM GM12878 Homo sapiens
BP000051.1 YY1 ENCSR000EWF K562 Homo sapiens
BP000112.1 YY1 ENCSR382MOM liver Homo sapiens
BP000176.1 YY1 ENCSR859RAO HEK293 Homo sapiens
BP000190.1 YY1 ENCSR994YLZ liver Homo sapiens
Showing 7 profiles of page 2 from 2 pages