Detailed information of deep learning profile BP000061.1

This page shows detailed deep learning-derived predictions and motifs for ZSCAN25 in HepG2 using a single trained BPNet model.

Model details

Name: ZSCAN25
Model ID: BP000061.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA2517.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q6NSZ9  
Source: ENCSR037LQB
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.75e-04 -1.03e-03 -5.80e-04 -2.37e-04 -6.80e-04 -1.03e-03 -2.12e-04 7.41e-04 -5.07e-04 -8.86e-04 -9.69e-05 1.08e-02 -2.32e-04 -4.83e-06 -4.97e-05 -4.80e-05 -9.58e-05 5.57e-04 -3.23e-05 ]
C [ 1.16e-02 5.81e-03 4.47e-03 1.21e-02 6.90e-03 9.02e-03 2.25e-03 1.96e-02 1.90e-02 4.55e-03 3.98e-02 2.81e-03 2.82e-02 5.66e-02 3.46e-02 5.34e-02 4.58e-04 1.73e-03 4.18e-02 ]
G [ 7.88e-04 9.90e-04 1.19e-03 -2.54e-04 2.67e-04 2.76e-04 3.85e-03 -2.77e-04 -7.22e-05 9.01e-04 1.95e-04 3.79e-04 1.52e-04 2.43e-05 1.21e-04 3.50e-05 1.62e-04 2.11e-02 1.27e-05 ]
T [ -1.08e-03 -9.72e-08 4.98e-04 -3.69e-04 -4.55e-04 -4.83e-04 -8.78e-04 -9.65e-04 1.34e-03 5.31e-03 1.25e-04 -8.88e-04 -9.56e-04 -4.85e-05 -3.18e-04 2.72e-05 4.19e-02 -8.28e-04 2.47e-04 ]

Frequency matrix

A [ 2300 2536 2221 2716 2955 3093 3032 2765 1014 1486 346 7302 674 4 254 19 157 1994 163 ]
C [ 11124 9033 8868 11429 10213 9377 7088 13844 14855 9263 18221 4693 15795 20853 17975 20884 1709 5135 19773 ]
G [ 4092 4148 4531 3193 3042 4186 6044 1518 1281 2632 490 2873 2494 21 735 5 1136 11044 195 ]
T [ 3460 5259 5356 3638 4766 4320 4812 2849 3826 7594 1919 6109 2013 98 2013 68 17974 2802 845 ]