Detailed information of deep learning profile BP000062.1

This page shows detailed deep learning-derived predictions and motifs for ZNF444 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF444
Model ID: BP000062.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): UN0191.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8N0Y2  
Source: ENCSR038XIA
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.81e-05 -5.25e-05 4.41e-06 -1.58e-05 -8.07e-05 -2.21e-04 2.47e-07 -1.48e-05 -8.24e-06 6.22e-06 1.82e-05 -7.09e-04 -4.56e-04 -3.48e-04 -3.37e-04 ]
C [ 5.95e-03 1.23e-02 1.33e-02 1.63e-02 1.72e-02 2.73e-04 2.26e-02 2.32e-02 1.73e-02 1.59e-02 1.71e-02 1.79e-03 6.14e-03 5.90e-03 5.00e-03 ]
G [ 6.84e-04 1.93e-05 6.95e-05 2.35e-04 5.33e-05 2.16e-04 4.72e-06 1.03e-05 4.49e-04 1.89e-04 6.45e-05 2.41e-04 2.91e-05 1.46e-04 2.61e-04 ]
T [ -1.88e-04 7.45e-05 1.33e-04 -3.04e-05 7.28e-05 6.40e-03 -4.39e-06 3.07e-05 -2.09e-05 -3.01e-05 1.28e-05 5.40e-04 -2.42e-04 -1.59e-04 -3.49e-04 ]

Frequency matrix

A [ 12101 6012 6808 3463 4173 15881 374 1542 5347 4452 3380 17128 12110 10703 12698 ]
C [ 38820 58338 57963 73603 73852 3100 84305 82647 61814 63300 72210 34044 41739 45542 42320 ]
G [ 15611 4969 4279 3074 1497 18229 627 967 4821 4562 4478 10715 13038 11930 12954 ]
T [ 20882 18095 18364 7274 7892 50204 2108 2257 15432 15099 7346 25527 20528 19239 19442 ]

1 profiles found for the same TF (ZNF444) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000082.1 ZNF444 ENCSR164RIC K562 Homo sapiens
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