Detailed information of deep learning profile BP000062.1

This page shows detailed deep learning-derived predictions and motifs for ZNF444 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF444
Model ID: BP000062.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): UN0191.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8N0Y2  
Source: ENCSR038XIA
Model: BPNet

Contribution weight matrix (CWM)

A [ -3.49e-04 -1.59e-04 -2.42e-04 5.40e-04 1.28e-05 -3.01e-05 -2.09e-05 3.07e-05 -4.39e-06 6.40e-03 7.28e-05 -3.04e-05 1.33e-04 7.45e-05 -1.88e-04 ]
C [ 2.61e-04 1.46e-04 2.91e-05 2.41e-04 6.45e-05 1.89e-04 4.49e-04 1.03e-05 4.72e-06 2.16e-04 5.33e-05 2.35e-04 6.95e-05 1.93e-05 6.84e-04 ]
G [ 5.00e-03 5.90e-03 6.14e-03 1.79e-03 1.71e-02 1.59e-02 1.73e-02 2.32e-02 2.26e-02 2.73e-04 1.72e-02 1.63e-02 1.33e-02 1.23e-02 5.95e-03 ]
T [ -3.37e-04 -3.48e-04 -4.56e-04 -7.09e-04 1.82e-05 6.22e-06 -8.24e-06 -1.48e-05 2.47e-07 -2.21e-04 -8.07e-05 -1.58e-05 4.41e-06 -5.25e-05 -7.81e-05 ]

Frequency matrix

A [ 19442 19239 20528 25527 7346 15099 15432 2257 2108 50204 7892 7274 18364 18095 20882 ]
C [ 12954 11930 13038 10715 4478 4562 4821 967 627 18229 1497 3074 4279 4969 15611 ]
G [ 42320 45542 41739 34044 72210 63300 61814 82647 84305 3100 73852 73603 57963 58338 38820 ]
T [ 12698 10703 12110 17128 3380 4452 5347 1542 374 15881 4173 3463 6808 6012 12101 ]

1 profiles found for the same TF (ZNF444) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000082.1 ZNF444 ENCSR164RIC K562 Homo sapiens
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