Detailed information of deep learning profile BP000063.1

This page shows detailed deep learning-derived predictions and motifs for REST in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000063.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR054JMQ
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.49e-05 -4.32e-04 1.10e-02 2.05e-04 0.00e+00 7.26e-05 8.93e-06 4.71e-04 1.77e-04 4.80e-06 2.11e-02 3.22e-04 -2.16e-04 1.51e-03 -5.41e-04 1.48e-04 -1.13e-03 ]
C [ -9.26e-05 6.11e-04 9.01e-03 -1.06e-04 6.75e-02 2.98e-05 5.53e-07 1.33e-04 6.27e-02 6.49e-02 -2.04e-04 1.94e-03 6.15e-03 8.05e-04 5.98e-03 4.79e-03 9.35e-03 ]
G [ 2.51e-02 2.47e-02 -1.48e-05 3.65e-02 3.55e-06 1.55e-04 4.82e-02 4.43e-05 7.25e-05 1.50e-06 2.25e-03 8.22e-03 6.49e-03 1.53e-02 2.37e-03 2.49e-03 3.96e-03 ]
T [ -1.70e-04 2.01e-04 1.13e-03 -3.47e-04 6.76e-05 5.66e-02 -1.59e-05 4.96e-02 -4.71e-05 -5.62e-05 -2.67e-04 7.56e-04 1.41e-03 1.28e-05 1.17e-02 9.21e-04 1.30e-03 ]

Frequency matrix

A [ 289 110 909 186 0 15 66 125 24 3 1309 429 313 401 295 340 274 ]
C [ 97 429 782 90 2178 31 178 22 2141 2160 251 510 672 496 652 831 768 ]
G [ 1633 1377 33 1743 5 10 1928 116 2 23 397 816 824 921 468 607 625 ]
T [ 185 288 480 185 21 2148 32 1941 37 18 247 449 395 386 789 426 537 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages