Detailed information of deep learning profile BP000063.1

This page shows detailed deep learning-derived predictions and motifs for REST in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000063.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR054JMQ
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.30e-03 9.21e-04 1.17e-02 1.28e-05 1.41e-03 7.56e-04 -2.67e-04 -5.62e-05 -4.71e-05 4.96e-02 -1.59e-05 5.66e-02 6.76e-05 -3.47e-04 1.13e-03 2.01e-04 -1.70e-04 ]
C [ 3.96e-03 2.49e-03 2.37e-03 1.53e-02 6.49e-03 8.22e-03 2.25e-03 1.50e-06 7.25e-05 4.43e-05 4.82e-02 1.55e-04 3.55e-06 3.65e-02 -1.48e-05 2.47e-02 2.51e-02 ]
G [ 9.35e-03 4.79e-03 5.98e-03 8.05e-04 6.15e-03 1.94e-03 -2.04e-04 6.49e-02 6.27e-02 1.33e-04 5.53e-07 2.98e-05 6.75e-02 -1.06e-04 9.01e-03 6.11e-04 -9.26e-05 ]
T [ -1.13e-03 1.48e-04 -5.41e-04 1.51e-03 -2.16e-04 3.22e-04 2.11e-02 4.80e-06 1.77e-04 4.71e-04 8.93e-06 7.26e-05 0.00e+00 2.05e-04 1.10e-02 -4.32e-04 4.49e-05 ]

Frequency matrix

A [ 537 426 789 386 395 449 247 18 37 1941 32 2148 21 185 480 288 185 ]
C [ 625 607 468 921 824 816 397 23 2 116 1928 10 5 1743 33 1377 1633 ]
G [ 768 831 652 496 672 510 251 2160 2141 22 178 31 2178 90 782 429 97 ]
T [ 274 340 295 401 313 429 1309 3 24 125 66 15 0 186 909 110 289 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages