Detailed information of deep learning profile BP000067.1

This page shows detailed deep learning-derived predictions and motifs for SP1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP1
Model ID: BP000067.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0079.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: M9PJG1  
Source: ENCSR085IXF
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.64e-04 -1.93e-04 -1.98e-05 -2.23e-04 2.44e-03 4.08e-04 -5.03e-04 -2.99e-05 0.00e+00 5.96e-05 -9.31e-04 1.46e-05 0.00e+00 3.89e-04 -5.97e-04 -6.38e-04 ]
C [ 3.99e-03 3.82e-03 3.31e-03 3.09e-03 1.06e-03 8.41e-04 2.46e-05 0.00e+00 1.60e-04 0.00e+00 2.69e-02 0.00e+00 0.00e+00 -1.79e-06 1.60e-04 1.68e-02 ]
G [ 3.68e-03 3.84e-03 2.56e-03 2.25e-03 1.03e-03 6.96e-03 1.05e-02 2.60e-02 3.88e-02 3.98e-02 0.00e+00 3.88e-02 2.92e-02 1.38e-02 1.20e-02 -4.72e-05 ]
T [ -4.85e-04 -4.45e-04 -2.56e-04 -2.64e-04 -1.77e-03 -5.71e-04 -2.54e-04 2.79e-06 0.00e+00 0.00e+00 -6.35e-04 0.00e+00 7.32e-05 -2.39e-04 -2.66e-04 2.36e-04 ]

Frequency matrix

A [ 13730 13545 12459 14045 18836 14768 10434 8820 170 29 14670 2183 497 16233 10062 12094 ]
C [ 19299 18464 17227 17610 14434 13039 7329 2442 373 413 49981 494 946 5054 7549 33616 ]
G [ 29314 30333 32850 30675 27852 39358 43554 59968 72459 72550 2493 69529 67389 47246 50196 17263 ]
T [ 10665 10666 10472 10677 11886 5842 11691 1778 6 16 5864 802 4176 4475 5201 10035 ]

Alternative motif patterns (AMPs)

6 profiles found for the same TF (SP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000008.1 SP1 ENCSR000BJX HepG2 Homo sapiens
BP000012.1 SP1 ENCSR000BKO K562 Homo sapiens
BP000026.1 SP1 ENCSR000BPE A549 Homo sapiens
BP000141.1 SP1 ENCSR583CGO WTC11 Homo sapiens
BP000286.1 SP1 ENCSR000BIR H1 Homo sapiens
BP001069.1 SP1 ENCSR991ELG K562 Homo sapiens
Showing 6 profiles of page 1 from 1 pages
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