Detailed information of deep learning profile BP000067.1

This page shows detailed deep learning-derived predictions and motifs for SP1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP1
Model ID: BP000067.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0079.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: M9PJG1  
Source: ENCSR085IXF
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.36e-04 -2.66e-04 -2.39e-04 7.32e-05 0.00e+00 -6.35e-04 0.00e+00 0.00e+00 2.79e-06 -2.54e-04 -5.71e-04 -1.77e-03 -2.64e-04 -2.56e-04 -4.45e-04 -4.85e-04 ]
C [ -4.72e-05 1.20e-02 1.38e-02 2.92e-02 3.88e-02 0.00e+00 3.98e-02 3.88e-02 2.60e-02 1.05e-02 6.96e-03 1.03e-03 2.25e-03 2.56e-03 3.84e-03 3.68e-03 ]
G [ 1.68e-02 1.60e-04 -1.79e-06 0.00e+00 0.00e+00 2.69e-02 0.00e+00 1.60e-04 0.00e+00 2.46e-05 8.41e-04 1.06e-03 3.09e-03 3.31e-03 3.82e-03 3.99e-03 ]
T [ -6.38e-04 -5.97e-04 3.89e-04 0.00e+00 1.46e-05 -9.31e-04 5.96e-05 0.00e+00 -2.99e-05 -5.03e-04 4.08e-04 2.44e-03 -2.23e-04 -1.98e-05 -1.93e-04 -8.64e-04 ]

Frequency matrix

A [ 10035 5201 4475 4176 802 5864 16 6 1778 11691 5842 11886 10677 10472 10666 10665 ]
C [ 17263 50196 47246 67389 69529 2493 72550 72459 59968 43554 39358 27852 30675 32850 30333 29314 ]
G [ 33616 7549 5054 946 494 49981 413 373 2442 7329 13039 14434 17610 17227 18464 19299 ]
T [ 12094 10062 16233 497 2183 14670 29 170 8820 10434 14768 18836 14045 12459 13545 13730 ]

Alternative motif patterns (AMPs)

6 profiles found for the same TF (SP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000008.1 SP1 ENCSR000BJX HepG2 Homo sapiens
BP000012.1 SP1 ENCSR000BKO K562 Homo sapiens
BP000026.1 SP1 ENCSR000BPE A549 Homo sapiens
BP000141.1 SP1 ENCSR583CGO WTC11 Homo sapiens
BP000286.1 SP1 ENCSR000BIR H1 Homo sapiens
BP001069.1 SP1 ENCSR991ELG K562 Homo sapiens
Showing 6 profiles of page 1 from 1 pages
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