Detailed information of deep learning profile BP000069.1

This page shows detailed deep learning-derived predictions and motifs for PRDM1 in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: PRDM1
Model ID: BP000069.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0508.1 MA0508.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O75626  
Source: ENCSR098YLE
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.85e-02 -2.47e-04 -7.58e-05 -6.76e-05 -2.58e-05 -6.50e-07 3.54e-03 -6.91e-04 -8.85e-04 ]
C [ 1.10e-03 3.45e-02 -8.21e-05 8.49e-04 -2.42e-06 5.77e-02 5.02e-04 2.18e-02 1.78e-03 ]
G [ 1.50e-03 -1.31e-04 -9.24e-07 -1.15e-04 -4.04e-05 0.00e+00 1.30e-04 -4.78e-04 -1.88e-04 ]
T [ -3.09e-04 -3.56e-04 3.74e-02 3.26e-02 4.15e-02 1.17e-04 -1.32e-03 -4.14e-04 1.54e-02 ]

Frequency matrix

A [ 123726 26102 12490 1352 2481 0 81052 32361 37270 ]
C [ 87031 207791 9058 38297 1147 298707 77915 177504 78260 ]
G [ 65656 24478 819 4851 3766 0 12010 18587 14779 ]
T [ 22378 40420 276424 254291 291397 84 127815 70338 168482 ]

2 profiles found for the same TF (PRDM1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000187.1 PRDM1 ENCSR977FEF A549 Homo sapiens
BP000973.1 PRDM1 ENCSR000ECY HeLa-S3 Homo sapiens
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