Detailed information of deep learning profile BP000071.1

This page shows detailed deep learning-derived predictions and motifs for ZNF274 in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF274
Model ID: BP000071.1
Cell line/tissue: HCT116
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA1592.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96GC6  
Source: ENCSR101FJM
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.18e-05 1.82e-04 2.58e-05 -1.24e-05 -3.60e-05 -3.48e-05 2.07e-04 4.42e-05 8.39e-04 1.03e-04 -1.81e-05 4.69e-03 0.00e+00 0.00e+00 2.21e-02 -8.53e-07 0.00e+00 3.87e-02 -2.22e-04 0.00e+00 0.00e+00 0.00e+00 -7.15e-05 0.00e+00 6.85e-04 -2.50e-04 1.36e-02 ]
C [ -7.87e-05 -1.13e-04 -3.31e-04 5.32e-05 -1.02e-05 6.78e-03 -7.01e-06 9.88e-03 -2.41e-04 6.10e-03 1.46e-02 0.00e+00 0.00e+00 -2.42e-05 0.00e+00 0.00e+00 0.00e+00 0.00e+00 -1.24e-04 0.00e+00 5.96e-04 5.88e-02 0.00e+00 3.97e-02 -9.32e-04 3.95e-04 0.00e+00 ]
G [ 1.06e-02 -5.65e-04 -1.35e-05 -6.13e-05 7.51e-06 -4.98e-05 2.30e-05 -1.38e-04 -1.20e-05 -5.28e-05 0.00e+00 -5.82e-06 2.66e-02 0.00e+00 8.30e-04 0.00e+00 4.09e-02 -5.82e-05 4.42e-04 0.00e+00 0.00e+00 0.00e+00 0.00e+00 0.00e+00 0.00e+00 2.90e-04 -2.38e-04 ]
T [ -5.91e-05 -5.04e-05 -1.25e-03 5.20e-03 1.12e-02 1.18e-03 5.92e-03 -5.60e-05 -4.17e-04 -1.21e-04 0.00e+00 -5.93e-05 0.00e+00 2.20e-02 0.00e+00 1.61e-02 0.00e+00 -3.83e-05 0.00e+00 1.61e-02 1.57e-02 0.00e+00 3.17e-02 -3.97e-06 2.70e-03 -5.74e-04 -9.03e-05 ]

Frequency matrix

A [ 202 178 125 262 77 59 866 71 1033 117 106 1031 288 126 1895 253 27 1358 1221 57 33 91 41 0 305 70 1075 ]
C [ 166 64 883 298 91 1366 80 1944 146 1240 1240 201 38 45 21 12 10 38 158 135 130 2060 46 2225 149 901 804 ]
G [ 1110 1124 137 64 60 68 90 62 73 96 107 127 1874 20 291 579 2190 778 34 32 8 7 38 6 10 608 245 ]
T [ 756 868 1089 1610 2006 741 1198 157 982 781 781 875 34 2043 27 1390 7 60 821 2010 2063 76 2109 3 1770 655 110 ]

Alternative motif patterns (AMPs)

5 profiles found for the same TF (ZNF274) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000046.1 ZNF274 ENCSR000EUI GM08714 Homo sapiens
BP000048.1 ZNF274 ENCSR000EUN H1 Homo sapiens
BP000050.1 ZNF274 ENCSR000EVX K562 Homo sapiens
BP000053.1 ZNF274 ENCSR000EWY NT2/D1 Homo sapiens
BP000085.1 ZNF274 ENCSR178QVJ HEK293 Homo sapiens
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