Detailed information of deep learning profile BP000075.1

This page shows detailed deep learning-derived predictions and motifs for REST in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000075.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR137ZMQ
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.99e-04 -8.97e-06 -2.36e-04 -7.68e-06 1.56e-05 4.05e-02 -1.83e-05 4.37e-02 3.53e-06 -7.27e-04 7.65e-04 -5.71e-06 -2.87e-04 ]
C [ 3.00e-04 1.33e-02 5.07e-04 6.14e-06 1.42e-05 4.07e-05 3.98e-02 3.24e-06 1.16e-04 2.40e-02 -1.23e-04 1.60e-02 1.89e-02 ]
G [ 1.16e-02 1.93e-04 -2.58e-04 4.95e-02 5.41e-02 6.31e-06 5.13e-05 4.16e-05 5.64e-02 -1.79e-04 6.63e-03 7.59e-04 -1.07e-04 ]
T [ -2.45e-04 3.95e-04 2.40e-02 8.26e-06 6.81e-06 2.05e-05 4.29e-05 3.68e-05 4.72e-06 5.16e-04 5.03e-03 -3.35e-04 1.75e-04 ]

Frequency matrix

A [ 1394 1717 931 174 116 6979 61 7615 90 1123 1953 1255 945 ]
C [ 2786 2873 776 31 11 380 7077 36 15 5135 336 4200 5086 ]
G [ 2380 1419 727 7506 7624 123 432 38 7648 450 2743 1681 375 ]
T [ 1214 1764 5339 62 22 291 203 84 20 1065 2741 637 1366 ]

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages