Detailed information of deep learning profile BP000075.1

This page shows detailed deep learning-derived predictions and motifs for REST in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000075.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR137ZMQ
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.99e-04 -8.97e-06 -2.36e-04 -7.68e-06 1.56e-05 4.05e-02 -1.83e-05 4.37e-02 3.53e-06 -7.27e-04 7.65e-04 -5.71e-06 -2.87e-04 ]
C [ 3.00e-04 1.33e-02 5.07e-04 6.14e-06 1.42e-05 4.07e-05 3.98e-02 3.24e-06 1.16e-04 2.40e-02 -1.23e-04 1.60e-02 1.89e-02 ]
G [ 1.16e-02 1.93e-04 -2.58e-04 4.95e-02 5.41e-02 6.31e-06 5.13e-05 4.16e-05 5.64e-02 -1.79e-04 6.63e-03 7.59e-04 -1.07e-04 ]
T [ -2.45e-04 3.95e-04 2.40e-02 8.26e-06 6.81e-06 2.05e-05 4.29e-05 3.68e-05 4.72e-06 5.16e-04 5.03e-03 -3.35e-04 1.75e-04 ]

Frequency matrix

A [ 1394 1717 931 174 116 6979 61 7615 90 1123 1953 1255 945 ]
C [ 2786 2873 776 31 11 380 7077 36 15 5135 336 4200 5086 ]
G [ 2380 1419 727 7506 7624 123 432 38 7648 450 2743 1681 375 ]
T [ 1214 1764 5339 62 22 291 203 84 20 1065 2741 637 1366 ]

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages