Detailed information of deep learning profile BP000088.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZBTB40
Model ID: BP000088.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA2488.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NUA8  
Source: ENCSR189YYK
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.00e-02 4.99e-02 -1.25e-05 8.74e-02 8.59e-02 8.91e-02 -4.16e-06 -6.94e-04 -1.23e-04 -7.24e-04 -6.46e-04 1.81e-02 -6.83e-04 ]
C [ -3.84e-04 2.99e-05 -4.18e-05 -1.97e-05 -2.60e-06 1.50e-05 -5.08e-06 1.89e-03 -8.91e-05 -3.16e-04 3.50e-04 7.93e-06 -3.00e-04 ]
G [ -9.53e-05 -1.37e-04 5.95e-05 5.01e-05 1.61e-06 -7.90e-06 1.01e-01 -1.14e-04 -1.14e-05 -4.39e-04 -5.89e-04 2.73e-05 2.83e-04 ]
T [ -8.68e-04 -2.12e-04 7.54e-02 -3.23e-06 -5.36e-06 -1.56e-06 -1.08e-05 4.34e-02 7.51e-02 3.76e-02 3.95e-02 -6.27e-04 2.03e-02 ]

Frequency matrix

A [ 6998 7998 225 9062 9108 9113 174 864 596 1370 1317 4309 1981 ]
C [ 684 180 208 59 61 33 63 1183 352 809 1135 1156 1190 ]
G [ 690 465 284 79 45 56 8941 194 313 1129 883 1367 1197 ]
T [ 898 627 8553 70 56 68 92 7029 8009 5962 5934 2438 4901 ]

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000078.1 ZBTB40 ENCSR158RYZ K562 Homo sapiens
BP000090.1 ZBTB40 ENCSR200AWS HepG2 Homo sapiens
BP000096.1 ZBTB40 ENCSR237VLT K562 Homo sapiens
BP000105.1 ZBTB40 ENCSR318LVG MCF-7 Homo sapiens
BP000131.1 ZBTB40 ENCSR525YFS HepG2 Homo sapiens
BP000140.1 ZBTB40 ENCSR579YNY K562 Homo sapiens
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