Detailed information of deep learning profile BP000088.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZBTB40
Model ID: BP000088.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA2488.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NUA8  
Source: ENCSR189YYK
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.03e-02 -6.27e-04 3.95e-02 3.76e-02 7.51e-02 4.34e-02 -1.08e-05 -1.56e-06 -5.36e-06 -3.23e-06 7.54e-02 -2.12e-04 -8.68e-04 ]
C [ 2.83e-04 2.73e-05 -5.89e-04 -4.39e-04 -1.14e-05 -1.14e-04 1.01e-01 -7.90e-06 1.61e-06 5.01e-05 5.95e-05 -1.37e-04 -9.53e-05 ]
G [ -3.00e-04 7.93e-06 3.50e-04 -3.16e-04 -8.91e-05 1.89e-03 -5.08e-06 1.50e-05 -2.60e-06 -1.97e-05 -4.18e-05 2.99e-05 -3.84e-04 ]
T [ -6.83e-04 1.81e-02 -6.46e-04 -7.24e-04 -1.23e-04 -6.94e-04 -4.16e-06 8.91e-02 8.59e-02 8.74e-02 -1.25e-05 4.99e-02 3.00e-02 ]

Frequency matrix

A [ 4901 2438 5934 5962 8009 7029 92 68 56 70 8553 627 898 ]
C [ 1197 1367 883 1129 313 194 8941 56 45 79 284 465 690 ]
G [ 1190 1156 1135 809 352 1183 63 33 61 59 208 180 684 ]
T [ 1981 4309 1317 1370 596 864 174 9113 9108 9062 225 7998 6998 ]

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000078.1 ZBTB40 ENCSR158RYZ K562 Homo sapiens
BP000090.1 ZBTB40 ENCSR200AWS HepG2 Homo sapiens
BP000096.1 ZBTB40 ENCSR237VLT K562 Homo sapiens
BP000105.1 ZBTB40 ENCSR318LVG MCF-7 Homo sapiens
BP000131.1 ZBTB40 ENCSR525YFS HepG2 Homo sapiens
BP000140.1 ZBTB40 ENCSR579YNY K562 Homo sapiens
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