Detailed information of deep learning profile BP000099.1

This page shows detailed deep learning-derived predictions and motifs for KLF4 in MCF-7 using a single trained BPNet model.

Model details

Name: KLF4
Model ID: BP000099.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0039.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q60793  
Source: ENCSR265WJC
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.08e-05 -1.39e-06 0.00e+00 -4.24e-04 -4.96e-05 -2.45e-04 -3.79e-04 -4.49e-04 -6.54e-04 -1.02e-03 ]
C [ -1.45e-06 5.58e-07 2.87e-06 1.78e-02 2.02e-06 6.45e-05 -1.96e-04 -3.15e-04 1.21e-02 5.84e-03 ]
G [ 3.92e-02 5.15e-02 5.61e-02 1.78e-05 5.12e-02 4.99e-03 1.59e-02 1.40e-02 5.82e-05 9.33e-04 ]
T [ -2.30e-06 -3.81e-06 -2.71e-06 7.80e-03 -2.83e-05 8.44e-03 -3.28e-04 -1.89e-04 2.01e-04 -1.85e-03 ]

Frequency matrix

A [ 3187 76 21 4255 1400 2526 6375 3990 4428 5074 ]
C [ 524 195 168 22047 700 4885 4436 4672 18156 15747 ]
G [ 32679 36611 36744 381 34224 19234 21943 23184 7674 9255 ]
T [ 594 102 51 10301 661 10339 4230 5137 6726 6907 ]