Detailed information of deep learning profile BP000108.1

This page shows detailed deep learning-derived predictions and motifs for SCRT2 in HEK293 using a single trained BPNet model.

Model details

Name: SCRT2
Model ID: BP000108.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0744.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NQ03  
Source: ENCSR338DGO
Model: BPNet

Contribution weight matrix (CWM)

A [ -3.10e-03 -2.84e-04 4.52e-02 9.33e-02 -2.50e-07 7.76e-02 3.55e-03 -5.51e-04 -4.43e-04 -1.58e-03 ]
C [ 9.08e-05 8.65e-02 -2.16e-03 -3.81e-06 1.44e-01 -3.13e-05 -6.47e-05 -1.01e-04 1.41e-04 -8.21e-04 ]
G [ 1.96e-02 -3.27e-04 -7.68e-05 -1.03e-05 -2.07e-07 -3.41e-06 5.05e-02 8.14e-02 -1.22e-04 2.03e-02 ]
T [ 6.31e-03 5.06e-04 -9.25e-04 -8.19e-05 5.82e-09 -1.65e-04 -3.87e-04 -1.52e-04 7.22e-02 4.04e-04 ]

Frequency matrix

A [ 11332 6245 62074 85130 14 89210 19680 3710 1589 13518 ]
C [ 15045 71749 14332 127 92546 772 1554 1846 4557 9539 ]
G [ 39019 3639 4736 4620 10 269 68638 83043 1469 51947 ]
T [ 27196 10958 11450 2714 21 2340 2719 3992 84976 17587 ]