Detailed information of deep learning profile BP000108.1

This page shows detailed deep learning-derived predictions and motifs for SCRT2 in HEK293 using a single trained BPNet model.

Model details

Name: SCRT2
Model ID: BP000108.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0744.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9NQ03  
Source: ENCSR338DGO
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.04e-04 7.22e-02 -1.52e-04 -3.87e-04 -1.65e-04 5.82e-09 -8.19e-05 -9.25e-04 5.06e-04 6.31e-03 ]
C [ 2.03e-02 -1.22e-04 8.14e-02 5.05e-02 -3.41e-06 -2.07e-07 -1.03e-05 -7.68e-05 -3.27e-04 1.96e-02 ]
G [ -8.21e-04 1.41e-04 -1.01e-04 -6.47e-05 -3.13e-05 1.44e-01 -3.81e-06 -2.16e-03 8.65e-02 9.08e-05 ]
T [ -1.58e-03 -4.43e-04 -5.51e-04 3.55e-03 7.76e-02 -2.50e-07 9.33e-02 4.52e-02 -2.84e-04 -3.10e-03 ]

Frequency matrix

A [ 17587 84976 3992 2719 2340 21 2714 11450 10958 27196 ]
C [ 51947 1469 83043 68638 269 10 4620 4736 3639 39019 ]
G [ 9539 4557 1846 1554 772 92546 127 14332 71749 15045 ]
T [ 13518 1589 3710 19680 89210 14 85130 62074 6245 11332 ]