Detailed information of deep learning profile BP000112.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000112.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1 MA0095.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR382MOM
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.90e-02 2.57e-02 1.30e-02 8.41e-02 7.43e-07 -3.39e-06 -6.14e-06 3.18e-05 -1.09e-03 -8.10e-04 1.18e-04 ]
C [ -2.62e-04 6.56e-04 4.09e-04 5.52e-06 1.22e-06 0.00e+00 -1.07e-05 4.19e-02 2.22e-03 -2.75e-04 1.74e-02 ]
G [ 1.51e-03 -5.86e-04 -2.32e-03 2.82e-06 3.22e-06 6.71e-02 5.36e-02 -1.75e-04 1.64e-02 1.82e-02 -4.87e-04 ]
T [ 6.28e-05 1.35e-03 -2.32e-04 5.89e-06 8.41e-02 7.74e-06 -3.17e-05 -1.81e-04 -7.45e-04 -2.84e-04 -4.28e-04 ]

Frequency matrix

A [ 20576 21444 24555 38290 10 32 382 8604 6085 5171 7610 ]
C [ 4072 7294 6739 173 6 27 191 24645 7665 6114 19678 ]
G [ 9326 3290 5224 21 37 38897 37226 1148 15217 20171 5286 ]
T [ 5039 6985 2495 529 38960 57 1214 4616 10046 7557 6439 ]

Alternative motif patterns (AMPs)

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000031.1 YY1 ENCSR000BSM SK-N-SH Homo sapiens
BP000033.1 YY1 ENCSR000BSY Ishikawa Homo sapiens
BP000047.1 YY1 ENCSR000EUM GM12878 Homo sapiens
BP000051.1 YY1 ENCSR000EWF K562 Homo sapiens
BP000054.1 YY1 ENCSR000EXG NT2/D1 Homo sapiens
BP000176.1 YY1 ENCSR859RAO HEK293 Homo sapiens
BP000190.1 YY1 ENCSR994YLZ liver Homo sapiens
Showing 7 profiles of page 2 from 2 pages