Detailed information of deep learning profile BP000132.1

This page shows detailed deep learning-derived predictions and motifs for GLIS2 in HEK293 using a single trained BPNet model.

Model details

Name: GLIS2
Model ID: BP000132.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0736.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9BZE0  
Source: ENCSR535DIA
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.37e-04 -9.00e-04 -7.53e-04 -9.02e-04 -6.01e-04 -6.91e-04 -9.78e-04 -1.65e-04 -4.03e-07 -7.24e-04 -9.23e-05 -2.57e-04 -4.32e-04 -7.18e-04 ]
C [ 5.47e-03 3.07e-03 7.20e-03 6.37e-03 4.34e-03 6.63e-03 1.92e-04 6.78e-06 1.43e-07 -8.00e-06 -1.08e-06 -9.46e-06 3.20e-03 4.14e-03 ]
G [ 8.41e-04 2.59e-04 -6.01e-04 -2.09e-04 3.20e-03 1.06e-03 6.61e-03 2.13e-02 3.12e-02 2.11e-02 2.73e-02 2.11e-02 1.94e-03 2.52e-03 ]
T [ -6.14e-04 -6.89e-04 -5.82e-04 -8.22e-04 -4.59e-04 -6.61e-04 -1.55e-03 -2.95e-04 -3.59e-06 -3.18e-04 -2.86e-05 -1.56e-04 2.62e-04 -5.82e-04 ]

Frequency matrix

A [ 81310 84604 73499 70505 64061 60662 117681 17387 47 72377 9577 29471 75529 80305 ]
C [ 169784 155834 186403 169546 162272 166581 81380 25401 417 36428 3844 40220 176373 148191 ]
G [ 172650 165387 151654 158442 202512 179478 166820 415016 488416 349705 473671 395807 128727 193449 ]
T [ 65371 83290 77559 90623 60270 82395 123234 31311 235 30605 2023 23618 108487 67170 ]

Alternative motif patterns (AMPs)

Other motif patterns