Detailed information of deep learning profile BP000132.1

This page shows detailed deep learning-derived predictions and motifs for GLIS2 in HEK293 using a single trained BPNet model.

Model details

Name: GLIS2
Model ID: BP000132.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0736.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9BZE0  
Source: ENCSR535DIA
Model: BPNet

Contribution weight matrix (CWM)

A [ -5.82e-04 2.62e-04 -1.56e-04 -2.86e-05 -3.18e-04 -3.59e-06 -2.95e-04 -1.55e-03 -6.61e-04 -4.59e-04 -8.22e-04 -5.82e-04 -6.89e-04 -6.14e-04 ]
C [ 2.52e-03 1.94e-03 2.11e-02 2.73e-02 2.11e-02 3.12e-02 2.13e-02 6.61e-03 1.06e-03 3.20e-03 -2.09e-04 -6.01e-04 2.59e-04 8.41e-04 ]
G [ 4.14e-03 3.20e-03 -9.46e-06 -1.08e-06 -8.00e-06 1.43e-07 6.78e-06 1.92e-04 6.63e-03 4.34e-03 6.37e-03 7.20e-03 3.07e-03 5.47e-03 ]
T [ -7.18e-04 -4.32e-04 -2.57e-04 -9.23e-05 -7.24e-04 -4.03e-07 -1.65e-04 -9.78e-04 -6.91e-04 -6.01e-04 -9.02e-04 -7.53e-04 -9.00e-04 -6.37e-04 ]

Frequency matrix

A [ 67170 108487 23618 2023 30605 235 31311 123234 82395 60270 90623 77559 83290 65371 ]
C [ 193449 128727 395807 473671 349705 488416 415016 166820 179478 202512 158442 151654 165387 172650 ]
G [ 148191 176373 40220 3844 36428 417 25401 81380 166581 162272 169546 186403 155834 169784 ]
T [ 80305 75529 29471 9577 72377 47 17387 117681 60662 64061 70505 73499 84604 81310 ]

Alternative motif patterns (AMPs)

Other motif patterns