Detailed information of deep learning profile BP000133.1

This page shows detailed deep learning-derived predictions and motifs for ZNF490 in HepG2 using a single trained BPNet model.

Model details

Name: ZNF490
Model ID: BP000133.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA2495.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9ULM2  
Source: ENCSR542PZA
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.66e-05 -7.62e-04 7.06e-03 1.15e-02 1.27e-03 -7.18e-05 2.94e-02 1.25e-03 -2.78e-04 3.48e-02 1.15e-02 2.76e-02 -2.16e-04 6.18e-03 2.14e-04 -1.51e-04 4.65e-03 -1.21e-04 -6.92e-04 ]
C [ -7.53e-04 3.05e-03 1.25e-03 -1.63e-04 -1.63e-04 4.53e-02 -3.60e-05 -5.08e-05 4.35e-02 3.67e-05 -6.53e-04 -3.55e-04 2.79e-02 1.76e-03 4.03e-03 1.61e-03 -5.06e-04 3.73e-04 -2.41e-04 ]
G [ 8.83e-03 -1.63e-03 -3.93e-04 1.37e-03 1.57e-02 1.83e-05 7.69e-05 3.57e-02 1.97e-05 4.42e-06 -1.12e-03 3.27e-04 -8.58e-05 1.41e-04 7.26e-04 1.99e-04 5.59e-05 4.19e-03 1.14e-02 ]
T [ 5.16e-05 1.14e-03 1.08e-04 -4.93e-05 -3.35e-04 -1.93e-05 -1.31e-05 -1.19e-05 8.08e-05 -1.27e-04 -4.61e-05 -2.41e-04 2.40e-04 -6.23e-04 -5.27e-04 -1.69e-04 -8.90e-05 -5.91e-04 -5.79e-04 ]

Frequency matrix

A [ 751 1205 1778 1489 1064 139 3155 361 69 3261 1629 2608 416 1350 940 906 1171 856 714 ]
C [ 446 802 782 275 269 3235 68 35 3334 36 529 425 2205 1132 1150 986 543 554 519 ]
G [ 1705 755 472 1192 1810 76 109 3077 53 54 706 347 193 295 846 679 788 1538 1691 ]
T [ 591 731 461 537 350 43 161 20 37 142 629 113 679 716 557 922 991 545 569 ]