Detailed information of deep learning profile BP000137.1

This page shows detailed deep learning-derived predictions and motifs for KLF12 in HepG2 using a single trained BPNet model.

Model details

Name: KLF12
Model ID: BP000137.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0742.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O35738  
Source: ENCSR552YWL
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.99e-04 -4.98e-04 -2.01e-05 -2.00e-04 -1.56e-04 3.54e-04 -5.63e-06 -1.18e-04 -1.94e-06 -5.42e-06 -9.31e-06 ]
C [ 1.37e-03 5.74e-04 5.34e-05 5.67e-03 4.56e-03 3.41e-03 1.26e-02 4.17e-07 1.13e-02 1.07e-02 8.86e-03 ]
G [ 1.70e-03 3.69e-03 5.82e-03 1.04e-04 2.01e-04 2.43e-04 3.73e-05 1.11e-02 6.17e-05 3.63e-05 8.11e-05 ]
T [ -4.32e-04 -2.80e-04 -1.48e-04 -7.14e-05 -3.25e-04 -5.33e-05 3.85e-06 -6.88e-05 9.59e-06 -6.17e-06 -9.41e-05 ]

Frequency matrix

A [ 5903 5504 4770 2832 2975 3408 27 13 13 6 156 ]
C [ 12635 8140 6689 21668 20611 23162 32457 0 31730 31517 29734 ]
G [ 10115 15371 17981 4144 4993 5539 156 32656 914 1085 1742 ]
T [ 4018 3655 3231 4027 4092 562 31 2 14 63 1039 ]

Alternative motif patterns (AMPs)