Detailed information of deep learning profile BP000138.1

This page shows detailed deep learning-derived predictions and motifs for ZNF18 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF18
Model ID: BP000138.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA2492.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17022  
Source: ENCSR553ZJQ
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.22e-04 8.09e-04 3.40e-03 -5.98e-04 3.91e-05 1.57e-05 2.31e-02 9.86e-05 2.90e-02 -1.86e-06 -2.88e-05 ]
C [ 1.63e-03 -2.78e-04 -4.45e-04 2.64e-04 -8.75e-06 2.68e-02 -4.81e-04 2.93e-02 1.71e-06 3.26e-02 9.63e-03 ]
G [ 3.61e-03 1.48e-03 1.35e-02 -2.38e-04 1.37e-04 -1.05e-05 5.81e-05 -6.49e-06 2.45e-05 2.36e-05 -3.33e-06 ]
T [ 4.06e-04 2.01e-03 -4.26e-05 9.44e-03 2.50e-02 1.19e-04 -1.33e-04 -1.11e-05 -6.75e-06 -8.22e-07 1.06e-03 ]

Frequency matrix

A [ 1950 3280 3206 1646 423 139 8411 292 10410 29 1118 ]
C [ 3095 1269 1767 3229 47 10278 1435 10274 52 10567 6580 ]
G [ 3312 3546 5536 1141 349 100 104 99 146 119 263 ]
T [ 2451 2713 300 4791 9989 291 858 143 200 93 2847 ]

1 profiles found for the same TF (ZNF18) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000188.1 ZNF18 ENCSR977HTH HEK293 Homo sapiens
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