Detailed information of deep learning profile BP000141.1

This page shows detailed deep learning-derived predictions and motifs for SP1 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP1
Model ID: BP000141.1
Cell line/tissue: WTC11
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0079.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: M9PJG1  
Source: ENCSR583CGO
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.92e-05 -2.77e-04 -2.62e-04 4.61e-04 -1.72e-06 -3.53e-04 0.00e+00 0.00e+00 -2.43e-06 4.74e-04 ]
C [ 4.20e-05 8.23e-03 9.81e-03 1.70e-02 3.45e-02 2.33e-05 3.55e-02 3.27e-02 2.03e-02 7.46e-03 ]
G [ 1.32e-02 1.03e-04 6.45e-06 1.42e-05 1.05e-05 2.28e-02 2.66e-06 1.50e-05 8.02e-06 -1.78e-05 ]
T [ -3.65e-04 -4.94e-05 1.44e-04 -2.76e-06 -1.34e-05 -3.64e-04 0.00e+00 0.00e+00 1.22e-04 -3.10e-04 ]

Frequency matrix

A [ 13289 6779 7636 7181 257 5195 49 30 1433 14518 ]
C [ 20915 63903 64825 82918 96785 2499 96606 94781 78790 59507 ]
G [ 49133 12697 7588 6409 289 74172 1279 2640 5921 10371 ]
T [ 14714 14671 18002 1542 720 16185 117 600 11907 13656 ]

6 profiles found for the same TF (SP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000008.1 SP1 ENCSR000BJX HepG2 Homo sapiens
BP000012.1 SP1 ENCSR000BKO K562 Homo sapiens
BP000026.1 SP1 ENCSR000BPE A549 Homo sapiens
BP000067.1 SP1 ENCSR085IXF liver Homo sapiens
BP000286.1 SP1 ENCSR000BIR H1 Homo sapiens
BP001069.1 SP1 ENCSR991ELG K562 Homo sapiens
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