Detailed information of deep learning profile BP000147.1

This page shows detailed deep learning-derived predictions and motifs for ZSCAN29 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZSCAN29
Model ID: BP000147.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA1602.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8IWY8  
Source: ENCSR635EXI
Model: BPNet

Contribution weight matrix (CWM)

A [ 6.13e-04 1.41e-03 -1.57e-04 -1.95e-03 -1.30e-04 -1.34e-05 5.58e-03 -5.89e-05 3.96e-02 -3.08e-05 4.24e-02 -2.20e-06 -9.84e-04 -5.91e-04 ]
C [ -6.12e-04 2.83e-04 1.73e-02 6.86e-03 -4.26e-04 1.21e-02 -1.43e-04 -1.84e-05 2.15e-05 -9.34e-05 -2.56e-05 4.77e-02 -4.56e-04 6.69e-03 ]
G [ 1.25e-02 -4.76e-04 -3.00e-04 -2.36e-04 3.59e-02 -7.34e-05 2.04e-02 -7.38e-05 -5.41e-04 2.11e-02 -1.95e-04 9.70e-07 7.62e-03 5.90e-04 ]
T [ -1.49e-04 2.79e-04 -8.46e-05 1.63e-03 -5.01e-04 1.91e-02 -1.85e-05 5.80e-02 -1.72e-05 2.18e-04 -2.93e-05 5.27e-06 -4.60e-04 -6.53e-04 ]

Frequency matrix

A [ 425 622 247 563 121 49 493 17 1957 89 2221 14 686 455 ]
C [ 318 702 1576 743 141 873 314 13 136 255 132 2332 535 937 ]
G [ 1282 679 251 443 2056 85 1545 14 303 1903 64 13 798 706 ]
T [ 408 430 359 684 115 1426 81 2389 37 186 16 74 414 335 ]

Other motif patterns

2 profiles found for the same TF (ZSCAN29) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000084.1 ZSCAN29 ENCSR175SZH K562 Homo sapiens
BP000116.1 ZSCAN29 ENCSR412YGM GM12878 Homo sapiens
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