Detailed information of deep learning profile BP000147.1

This page shows detailed deep learning-derived predictions and motifs for ZSCAN29 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZSCAN29
Model ID: BP000147.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA1602.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8IWY8  
Source: ENCSR635EXI
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.53e-04 -4.60e-04 5.27e-06 -2.93e-05 2.18e-04 -1.72e-05 5.80e-02 -1.85e-05 1.91e-02 -5.01e-04 1.63e-03 -8.46e-05 2.79e-04 -1.49e-04 ]
C [ 5.90e-04 7.62e-03 9.70e-07 -1.95e-04 2.11e-02 -5.41e-04 -7.38e-05 2.04e-02 -7.34e-05 3.59e-02 -2.36e-04 -3.00e-04 -4.76e-04 1.25e-02 ]
G [ 6.69e-03 -4.56e-04 4.77e-02 -2.56e-05 -9.34e-05 2.15e-05 -1.84e-05 -1.43e-04 1.21e-02 -4.26e-04 6.86e-03 1.73e-02 2.83e-04 -6.12e-04 ]
T [ -5.91e-04 -9.84e-04 -2.20e-06 4.24e-02 -3.08e-05 3.96e-02 -5.89e-05 5.58e-03 -1.34e-05 -1.30e-04 -1.95e-03 -1.57e-04 1.41e-03 6.13e-04 ]

Frequency matrix

A [ 335 414 74 16 186 37 2389 81 1426 115 684 359 430 408 ]
C [ 706 798 13 64 1903 303 14 1545 85 2056 443 251 679 1282 ]
G [ 937 535 2332 132 255 136 13 314 873 141 743 1576 702 318 ]
T [ 455 686 14 2221 89 1957 17 493 49 121 563 247 622 425 ]

Other motif patterns

2 profiles found for the same TF (ZSCAN29) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000084.1 ZSCAN29 ENCSR175SZH K562 Homo sapiens
BP000116.1 ZSCAN29 ENCSR412YGM GM12878 Homo sapiens
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