Detailed information of deep learning profile BP000161.1

This page shows detailed deep learning-derived predictions and motifs for ZNF565 in SK-N-SH using a single trained BPNet model.

Model details

Name: ZNF565
Model ID: BP000161.1
Cell line/tissue: SK-N-SH
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): UN0204.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8N9K5  
Source: ENCSR754ALX
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.11e-04 -8.40e-05 -9.26e-05 1.71e-04 8.37e-05 -1.09e-03 -4.22e-05 -3.27e-06 3.94e-05 2.14e-05 -4.79e-05 1.01e-02 -1.35e-04 1.87e-02 1.07e-02 -2.32e-04 3.04e-02 -6.90e-05 -1.87e-05 7.07e-05 -1.62e-04 -1.08e-03 -4.04e-04 -9.90e-05 ]
C [ 1.72e-04 5.01e-05 -2.09e-05 -2.16e-05 2.88e-02 -2.22e-04 4.56e-04 2.54e-02 3.22e-02 -4.99e-04 1.06e-02 5.16e-04 2.32e-02 2.52e-05 -2.24e-04 8.68e-03 -1.09e-05 1.27e-06 1.58e-05 4.56e-05 1.55e-02 -2.01e-04 -1.83e-05 1.49e-02 ]
G [ -4.85e-05 1.77e-02 7.25e-03 2.79e-02 -7.86e-05 6.26e-04 -1.40e-04 1.52e-05 2.92e-06 6.29e-05 1.54e-05 3.31e-05 -2.77e-04 8.12e-05 3.01e-03 6.38e-05 -4.02e-05 7.20e-05 3.02e-02 2.43e-02 -8.61e-05 3.26e-03 1.41e-02 -1.54e-04 ]
T [ 1.03e-02 1.18e-05 -2.16e-04 -2.46e-04 4.10e-05 1.51e-02 1.90e-02 -1.07e-05 2.11e-05 1.65e-02 1.54e-03 -1.55e-04 -1.87e-04 -1.37e-04 -3.92e-04 -1.61e-04 6.39e-06 1.62e-02 6.10e-06 -1.10e-04 -1.56e-03 -3.34e-04 1.16e-04 -4.65e-04 ]

Frequency matrix

A [ 27 9 85 14 2 21 6 1 2 2 4 229 16 275 156 15 295 3 0 5 14 89 24 13 ]
C [ 12 14 2 2 264 8 16 290 297 14 197 49 248 7 6 222 1 2 0 4 188 20 9 230 ]
G [ 7 264 191 280 2 21 9 3 0 2 22 11 6 12 122 20 4 6 298 287 5 136 248 22 ]
T [ 254 13 22 4 32 250 269 6 1 282 77 11 30 6 16 43 0 289 2 4 93 55 19 35 ]

Other motif patterns