Detailed information of deep learning profile BP000164.1

This page shows detailed deep learning-derived predictions and motifs for BCL6 in HepG2 using a single trained BPNet model.

Model details

Name: BCL6
Model ID: BP000164.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0463.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q4H3U8  
Source: ENCSR759BDG
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.78e-04 -3.04e-04 -3.96e-04 -7.50e-04 -3.33e-05 1.46e-05 -1.32e-03 5.62e-02 4.69e-04 -1.74e-04 4.30e-02 5.01e-02 ]
C [ -1.07e-03 3.11e-02 -3.70e-05 5.33e-05 -3.62e-05 9.12e-02 9.20e-03 -3.52e-05 2.37e-05 -1.49e-04 -3.30e-04 -3.05e-04 ]
G [ 2.14e-02 -6.76e-04 -8.95e-05 -5.53e-04 -2.94e-06 0.00e+00 1.35e-03 -8.83e-05 5.27e-02 6.87e-02 -3.01e-04 -4.29e-04 ]
T [ -8.03e-04 -7.80e-04 2.50e-02 2.77e-02 7.53e-02 3.97e-05 8.97e-03 -1.74e-05 -3.08e-04 -8.06e-05 -5.07e-04 -2.31e-04 ]

Frequency matrix

A [ 3602 3320 2637 1243 215 0 1276 16249 2797 478 13469 15115 ]
C [ 2340 10483 3157 3331 330 18305 7454 405 115 522 1122 894 ]
G [ 8130 1959 1142 1460 136 0 1491 649 14978 16212 2599 683 ]
T [ 4233 2543 11369 12270 17624 0 8084 1002 415 1094 1115 1613 ]

Alternative motif patterns (AMPs)