Detailed information of deep learning profile BP000169.1

This page shows detailed deep learning-derived predictions and motifs for SP2 in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP2
Model ID: BP000169.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0516.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02086  
Source: ENCSR807LQP
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.30e-04 -2.16e-04 -2.09e-04 -4.62e-05 -2.35e-04 2.83e-04 2.12e-03 6.09e-04 -3.32e-05 3.53e-03 6.03e-06 1.22e-06 -6.34e-04 -7.10e-05 -3.18e-06 8.58e-05 1.58e-03 -7.68e-04 ]
C [ 6.47e-03 6.66e-03 4.41e-03 2.64e-03 2.34e-03 1.36e-03 1.78e-04 -4.00e-04 -1.68e-04 3.81e-05 0.00e+00 1.52e-05 2.47e-02 -3.14e-07 0.00e+00 -1.44e-04 3.66e-04 1.18e-02 ]
G [ 3.16e-03 2.43e-03 2.20e-03 3.28e-03 2.76e-03 2.39e-03 2.92e-03 9.06e-03 9.69e-03 2.45e-02 5.34e-02 5.21e-02 1.34e-06 4.09e-02 4.05e-02 1.75e-02 1.80e-03 -1.28e-04 ]
T [ -3.47e-04 -2.83e-04 -2.05e-04 -1.75e-04 1.92e-04 -6.96e-05 -7.81e-04 -3.88e-04 7.66e-04 1.55e-05 7.25e-07 0.00e+00 -5.90e-04 -5.68e-05 7.73e-05 -1.79e-04 -4.68e-04 -2.61e-04 ]

Frequency matrix

A [ 37126 36701 38304 38445 35152 41243 50042 42217 40683 48188 230 329 61765 8639 1130 35243 43699 34773 ]
C [ 58312 59111 56819 53508 53615 50985 40573 33799 17393 4656 381 1460 114835 4757 1040 15286 33930 83635 ]
G [ 79148 78298 78658 82036 86293 81137 83245 108315 109455 149185 204045 202765 3117 183393 189044 135078 102189 58704 ]
T [ 30080 30555 30883 30676 29605 31301 30805 20334 37135 2637 9 111 24948 7877 13451 19058 24848 27553 ]

1 profiles found for the same TF (SP2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001012.1 SP2 ENCSR946RZN HepG2 Homo sapiens
Showing 1 profiles of page 1 from 1 pages
  • 1 (current)