Detailed information of deep learning profile BP000169.1

This page shows detailed deep learning-derived predictions and motifs for SP2 in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP2
Model ID: BP000169.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0516.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02086  
Source: ENCSR807LQP
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.61e-04 -4.68e-04 -1.79e-04 7.73e-05 -5.68e-05 -5.90e-04 0.00e+00 7.25e-07 1.55e-05 7.66e-04 -3.88e-04 -7.81e-04 -6.96e-05 1.92e-04 -1.75e-04 -2.05e-04 -2.83e-04 -3.47e-04 ]
C [ -1.28e-04 1.80e-03 1.75e-02 4.05e-02 4.09e-02 1.34e-06 5.21e-02 5.34e-02 2.45e-02 9.69e-03 9.06e-03 2.92e-03 2.39e-03 2.76e-03 3.28e-03 2.20e-03 2.43e-03 3.16e-03 ]
G [ 1.18e-02 3.66e-04 -1.44e-04 0.00e+00 -3.14e-07 2.47e-02 1.52e-05 0.00e+00 3.81e-05 -1.68e-04 -4.00e-04 1.78e-04 1.36e-03 2.34e-03 2.64e-03 4.41e-03 6.66e-03 6.47e-03 ]
T [ -7.68e-04 1.58e-03 8.58e-05 -3.18e-06 -7.10e-05 -6.34e-04 1.22e-06 6.03e-06 3.53e-03 -3.32e-05 6.09e-04 2.12e-03 2.83e-04 -2.35e-04 -4.62e-05 -2.09e-04 -2.16e-04 -4.30e-04 ]

Frequency matrix

A [ 27553 24848 19058 13451 7877 24948 111 9 2637 37135 20334 30805 31301 29605 30676 30883 30555 30080 ]
C [ 58704 102189 135078 189044 183393 3117 202765 204045 149185 109455 108315 83245 81137 86293 82036 78658 78298 79148 ]
G [ 83635 33930 15286 1040 4757 114835 1460 381 4656 17393 33799 40573 50985 53615 53508 56819 59111 58312 ]
T [ 34773 43699 35243 1130 8639 61765 329 230 48188 40683 42217 50042 41243 35152 38445 38304 36701 37126 ]

1 profiles found for the same TF (SP2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001012.1 SP2 ENCSR946RZN HepG2 Homo sapiens
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