Detailed information of deep learning profile BP000171.1

This page shows detailed deep learning-derived predictions and motifs for OVOL1 in MCF-7 using a single trained BPNet model.

Model details

Name: OVOL1
Model ID: BP000171.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA1544.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O14753  
Source: ENCSR829WBA
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.87e-03 1.69e-05 -7.26e-04 7.69e-07 -2.97e-06 -2.81e-07 5.20e-02 ]
C [ -1.56e-03 6.45e-02 6.05e-02 0.00e+00 6.90e-03 4.49e-06 -1.13e-04 ]
G [ -9.13e-04 9.73e-06 2.48e-05 8.97e-02 2.33e-05 -9.92e-07 -2.82e-04 ]
T [ 7.84e-04 0.00e+00 -4.18e-04 -6.17e-06 4.51e-02 7.35e-02 -2.75e-05 ]

Frequency matrix

A [ 12490 407 7819 137 625 412 23758 ]
C [ 9803 37085 20985 3 10135 199 2496 ]
G [ 6089 102 894 36536 810 98 4711 ]
T [ 9315 102 7998 1020 26125 36987 6731 ]