Detailed information of deep learning profile BP000179.1

This page shows detailed deep learning-derived predictions and motifs for REST in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000179.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR893QWP
Model: BPNet

Contribution weight matrix (CWM)

A [ -9.30e-04 3.74e-03 8.83e-04 1.99e-06 1.45e-04 -1.07e-04 8.80e-05 1.30e-04 3.62e-06 3.12e-02 2.64e-03 5.96e-04 2.75e-03 1.51e-04 ]
C [ 1.59e-03 5.11e-03 -1.83e-04 6.75e-02 -3.67e-06 -2.26e-04 7.71e-05 7.86e-02 8.73e-02 -1.45e-05 6.82e-04 1.31e-02 -1.33e-04 7.06e-03 ]
G [ 1.18e-02 -3.01e-04 3.80e-02 -2.53e-05 1.30e-04 4.98e-02 1.28e-04 7.10e-05 7.29e-06 8.37e-04 1.82e-02 2.22e-03 9.13e-03 3.93e-03 ]
T [ 1.82e-03 2.66e-03 -3.92e-04 8.25e-06 4.77e-02 1.26e-04 5.69e-02 5.75e-05 0.00e+00 8.92e-06 3.56e-04 3.29e-03 3.10e-03 5.20e-03 ]

Frequency matrix

A [ 1592 2870 1907 274 1063 397 405 52 8 6514 2479 2410 2149 1902 ]
C [ 2449 2632 728 9249 88 730 130 9778 9936 976 1737 2367 1617 2417 ]
G [ 3302 866 6135 141 243 7478 594 25 12 1091 4058 2673 3926 2408 ]
T [ 2636 3611 1209 315 8585 1374 8850 124 23 1398 1705 2529 2287 3252 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages