Detailed information of deep learning profile BP000179.1

This page shows detailed deep learning-derived predictions and motifs for REST in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000179.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR893QWP
Model: BPNet

Contribution weight matrix (CWM)

A [ -9.30e-04 3.74e-03 8.83e-04 1.99e-06 1.45e-04 -1.07e-04 8.80e-05 1.30e-04 3.62e-06 3.12e-02 2.64e-03 5.96e-04 2.75e-03 1.51e-04 ]
C [ 1.59e-03 5.11e-03 -1.83e-04 6.75e-02 -3.67e-06 -2.26e-04 7.71e-05 7.86e-02 8.73e-02 -1.45e-05 6.82e-04 1.31e-02 -1.33e-04 7.06e-03 ]
G [ 1.18e-02 -3.01e-04 3.80e-02 -2.53e-05 1.30e-04 4.98e-02 1.28e-04 7.10e-05 7.29e-06 8.37e-04 1.82e-02 2.22e-03 9.13e-03 3.93e-03 ]
T [ 1.82e-03 2.66e-03 -3.92e-04 8.25e-06 4.77e-02 1.26e-04 5.69e-02 5.75e-05 0.00e+00 8.92e-06 3.56e-04 3.29e-03 3.10e-03 5.20e-03 ]

Frequency matrix

A [ 1592 2870 1907 274 1063 397 405 52 8 6514 2479 2410 2149 1902 ]
C [ 2449 2632 728 9249 88 730 130 9778 9936 976 1737 2367 1617 2417 ]
G [ 3302 866 6135 141 243 7478 594 25 12 1091 4058 2673 3926 2408 ]
T [ 2636 3611 1209 315 8585 1374 8850 124 23 1398 1705 2529 2287 3252 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages