Detailed information of deep learning profile BP000179.1

This page shows detailed deep learning-derived predictions and motifs for REST in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000179.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR893QWP
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.20e-03 3.10e-03 3.29e-03 3.56e-04 8.92e-06 0.00e+00 5.75e-05 5.69e-02 1.26e-04 4.77e-02 8.25e-06 -3.92e-04 2.66e-03 1.82e-03 ]
C [ 3.93e-03 9.13e-03 2.22e-03 1.82e-02 8.37e-04 7.29e-06 7.10e-05 1.28e-04 4.98e-02 1.30e-04 -2.53e-05 3.80e-02 -3.01e-04 1.18e-02 ]
G [ 7.06e-03 -1.33e-04 1.31e-02 6.82e-04 -1.45e-05 8.73e-02 7.86e-02 7.71e-05 -2.26e-04 -3.67e-06 6.75e-02 -1.83e-04 5.11e-03 1.59e-03 ]
T [ 1.51e-04 2.75e-03 5.96e-04 2.64e-03 3.12e-02 3.62e-06 1.30e-04 8.80e-05 -1.07e-04 1.45e-04 1.99e-06 8.83e-04 3.74e-03 -9.30e-04 ]

Frequency matrix

A [ 3252 2287 2529 1705 1398 23 124 8850 1374 8585 315 1209 3611 2636 ]
C [ 2408 3926 2673 4058 1091 12 25 594 7478 243 141 6135 866 3302 ]
G [ 2417 1617 2367 1737 976 9936 9778 130 730 88 9249 728 2632 2449 ]
T [ 1902 2149 2410 2479 6514 8 52 405 397 1063 274 1907 2870 1592 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages