Detailed information of deep learning profile BP000180.1

This page shows detailed deep learning-derived predictions and motifs for REST in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000180.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR896UBV
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.06e-04 -5.09e-04 -5.61e-04 -4.78e-06 1.27e-04 6.52e-02 -8.96e-05 7.04e-02 1.77e-05 -1.69e-03 7.12e-04 4.58e-04 -5.13e-04 ]
C [ -3.97e-04 2.01e-02 7.62e-04 -8.82e-06 7.48e-06 1.26e-04 4.89e-02 1.10e-05 -7.26e-06 4.01e-02 -3.25e-04 1.87e-02 2.43e-02 ]
G [ 2.27e-02 3.25e-04 -3.48e-04 8.36e-02 8.00e-02 -1.47e-05 -4.14e-04 1.79e-05 8.92e-02 -7.30e-04 1.23e-02 6.63e-04 -4.60e-04 ]
T [ -3.27e-04 3.07e-03 3.92e-02 6.86e-07 3.94e-05 -3.38e-05 6.31e-05 -3.14e-05 -4.14e-06 1.05e-04 7.70e-03 -8.13e-04 1.25e-04 ]

Frequency matrix

A [ 2411 3008 1633 230 544 13702 855 14434 143 1883 4307 2720 2170 ]
C [ 4945 5575 1505 24 5 616 11395 101 37 10441 705 7057 8439 ]
G [ 5286 2657 1674 14532 14252 110 1827 130 14643 899 5362 3744 1472 ]
T [ 2206 3608 10035 62 47 420 772 183 25 1625 4474 1326 2768 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages