Detailed information of deep learning profile BP000180.1

This page shows detailed deep learning-derived predictions and motifs for REST in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000180.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR896UBV
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.25e-04 -8.13e-04 7.70e-03 1.05e-04 -4.14e-06 -3.14e-05 6.31e-05 -3.38e-05 3.94e-05 6.86e-07 3.92e-02 3.07e-03 -3.27e-04 ]
C [ -4.60e-04 6.63e-04 1.23e-02 -7.30e-04 8.92e-02 1.79e-05 -4.14e-04 -1.47e-05 8.00e-02 8.36e-02 -3.48e-04 3.25e-04 2.27e-02 ]
G [ 2.43e-02 1.87e-02 -3.25e-04 4.01e-02 -7.26e-06 1.10e-05 4.89e-02 1.26e-04 7.48e-06 -8.82e-06 7.62e-04 2.01e-02 -3.97e-04 ]
T [ -5.13e-04 4.58e-04 7.12e-04 -1.69e-03 1.77e-05 7.04e-02 -8.96e-05 6.52e-02 1.27e-04 -4.78e-06 -5.61e-04 -5.09e-04 3.06e-04 ]

Frequency matrix

A [ 2768 1326 4474 1625 25 183 772 420 47 62 10035 3608 2206 ]
C [ 1472 3744 5362 899 14643 130 1827 110 14252 14532 1674 2657 5286 ]
G [ 8439 7057 705 10441 37 101 11395 616 5 24 1505 5575 4945 ]
T [ 2170 2720 4307 1883 143 14434 855 13702 544 230 1633 3008 2411 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages