Detailed information of deep learning profile BP000186.1

This page shows detailed deep learning-derived predictions and motifs for PATZ1 in HEK293 using a single trained BPNet model.

Model details

Name: PATZ1
Model ID: BP000186.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA1961.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9HBE1  
Source: ENCSR966ULI
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.69e-04 -2.88e-04 -5.33e-04 -3.61e-04 -7.34e-04 -6.30e-04 -1.02e-03 -8.73e-04 0.00e+00 0.00e+00 -2.50e-03 -2.00e-03 0.00e+00 0.00e+00 -7.56e-05 -2.02e-04 ]
C [ 4.01e-03 4.71e-03 4.93e-03 3.90e-03 2.98e-03 1.60e-03 4.61e-04 1.69e-05 0.00e+00 0.00e+00 -6.20e-04 1.76e-04 0.00e+00 3.78e-05 0.00e+00 5.51e-04 ]
G [ 3.01e-04 1.87e-04 2.37e-04 3.57e-04 4.80e-04 1.57e-03 4.44e-03 8.90e-03 1.60e-02 1.98e-02 1.28e-02 1.21e-02 2.23e-02 1.95e-02 1.54e-02 1.01e-02 ]
T [ -7.66e-04 -7.44e-04 -5.11e-04 -5.16e-04 -4.92e-04 -4.65e-04 -6.45e-04 -3.83e-04 0.00e+00 0.00e+00 -2.02e-03 -1.30e-03 0.00e+00 0.00e+00 0.00e+00 -1.55e-04 ]

Frequency matrix

A [ 24359 24307 24324 24016 23996 24376 28105 16832 3141 479 18496 35413 39 627 6501 14675 ]
C [ 34378 33588 31428 33412 35716 35262 31526 17307 3155 1183 22179 36067 502 3836 7185 26043 ]
G [ 53957 55915 58567 55791 53034 53532 49989 87435 126966 132217 83676 45657 133448 128963 118556 85381 ]
T [ 21396 20281 19773 20872 21345 20922 24471 12518 828 212 9739 16954 102 665 1848 7992 ]