Detailed information of deep learning profile BP000190.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000190.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR994YLZ
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.47e-02 2.26e-02 1.29e-02 6.94e-02 -1.13e-06 3.97e-06 -3.14e-05 -4.34e-04 -1.01e-03 -9.56e-04 -1.54e-04 ]
C [ -3.94e-05 7.71e-04 -7.99e-04 1.80e-06 4.88e-06 7.22e-07 -7.23e-06 3.41e-02 2.20e-03 -4.45e-04 1.36e-02 ]
G [ 8.45e-04 -4.77e-04 -1.21e-03 -2.72e-07 6.21e-07 5.83e-02 4.51e-02 -3.27e-04 1.23e-02 1.60e-02 -4.41e-04 ]
T [ -5.50e-05 5.67e-04 -2.45e-04 1.64e-05 6.87e-02 2.55e-05 -4.59e-05 -2.06e-04 -1.51e-03 -3.13e-04 -4.38e-04 ]

Frequency matrix

A [ 19566 20181 21731 35047 7 53 489 8219 5668 4948 7026 ]
C [ 3377 6380 6085 25 3 17 252 20865 7342 5626 17047 ]
G [ 7925 3050 5034 6 54 35017 32986 1630 13782 17732 4961 ]
T [ 4282 5539 2300 72 35086 63 1423 4436 8358 6845 6116 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000009.1 YY1 ENCSR000BKD H1 Homo sapiens
BP000011.1 YY1 ENCSR000BKJ GM12891 Homo sapiens
BP000013.1 YY1 ENCSR000BKU K562 Homo sapiens
BP000014.1 YY1 ENCSR000BLT GM12892 Homo sapiens
BP000015.1 YY1 ENCSR000BLZ SK-N-SH Homo sapiens
BP000016.1 YY1 ENCSR000BMH K562 Homo sapiens
BP000020.1 YY1 ENCSR000BNP GM12878 Homo sapiens
BP000021.1 YY1 ENCSR000BNT HepG2 Homo sapiens
BP000022.1 YY1 ENCSR000BNX HCT116 Homo sapiens
BP000028.1 YY1 ENCSR000BPM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages