Detailed information of deep learning profile BP000190.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000190.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR994YLZ
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.47e-02 2.26e-02 1.29e-02 6.94e-02 -1.13e-06 3.97e-06 -3.14e-05 -4.34e-04 -1.01e-03 -9.56e-04 -1.54e-04 ]
C [ -3.94e-05 7.71e-04 -7.99e-04 1.80e-06 4.88e-06 7.22e-07 -7.23e-06 3.41e-02 2.20e-03 -4.45e-04 1.36e-02 ]
G [ 8.45e-04 -4.77e-04 -1.21e-03 -2.72e-07 6.21e-07 5.83e-02 4.51e-02 -3.27e-04 1.23e-02 1.60e-02 -4.41e-04 ]
T [ -5.50e-05 5.67e-04 -2.45e-04 1.64e-05 6.87e-02 2.55e-05 -4.59e-05 -2.06e-04 -1.51e-03 -3.13e-04 -4.38e-04 ]

Frequency matrix

A [ 19566 20181 21731 35047 7 53 489 8219 5668 4948 7026 ]
C [ 3377 6380 6085 25 3 17 252 20865 7342 5626 17047 ]
G [ 7925 3050 5034 6 54 35017 32986 1630 13782 17732 4961 ]
T [ 4282 5539 2300 72 35086 63 1423 4436 8358 6845 6116 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000031.1 YY1 ENCSR000BSM SK-N-SH Homo sapiens
BP000033.1 YY1 ENCSR000BSY Ishikawa Homo sapiens
BP000047.1 YY1 ENCSR000EUM GM12878 Homo sapiens
BP000051.1 YY1 ENCSR000EWF K562 Homo sapiens
BP000054.1 YY1 ENCSR000EXG NT2/D1 Homo sapiens
BP000112.1 YY1 ENCSR382MOM liver Homo sapiens
BP000176.1 YY1 ENCSR859RAO HEK293 Homo sapiens
Showing 7 profiles of page 2 from 2 pages