Detailed information of deep learning profile BP000190.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000190.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR994YLZ
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.38e-04 -3.13e-04 -1.51e-03 -2.06e-04 -4.59e-05 2.55e-05 6.87e-02 1.64e-05 -2.45e-04 5.67e-04 -5.50e-05 ]
C [ -4.41e-04 1.60e-02 1.23e-02 -3.27e-04 4.51e-02 5.83e-02 6.21e-07 -2.72e-07 -1.21e-03 -4.77e-04 8.45e-04 ]
G [ 1.36e-02 -4.45e-04 2.20e-03 3.41e-02 -7.23e-06 7.22e-07 4.88e-06 1.80e-06 -7.99e-04 7.71e-04 -3.94e-05 ]
T [ -1.54e-04 -9.56e-04 -1.01e-03 -4.34e-04 -3.14e-05 3.97e-06 -1.13e-06 6.94e-02 1.29e-02 2.26e-02 2.47e-02 ]

Frequency matrix

A [ 6116 6845 8358 4436 1423 63 35086 72 2300 5539 4282 ]
C [ 4961 17732 13782 1630 32986 35017 54 6 5034 3050 7925 ]
G [ 17047 5626 7342 20865 252 17 3 25 6085 6380 3377 ]
T [ 7026 4948 5668 8219 489 53 7 35047 21731 20181 19566 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000009.1 YY1 ENCSR000BKD H1 Homo sapiens
BP000011.1 YY1 ENCSR000BKJ GM12891 Homo sapiens
BP000013.1 YY1 ENCSR000BKU K562 Homo sapiens
BP000014.1 YY1 ENCSR000BLT GM12892 Homo sapiens
BP000015.1 YY1 ENCSR000BLZ SK-N-SH Homo sapiens
BP000016.1 YY1 ENCSR000BMH K562 Homo sapiens
BP000020.1 YY1 ENCSR000BNP GM12878 Homo sapiens
BP000021.1 YY1 ENCSR000BNT HepG2 Homo sapiens
BP000022.1 YY1 ENCSR000BNX HCT116 Homo sapiens
BP000028.1 YY1 ENCSR000BPM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages