Detailed information of deep learning profile BP000192.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000192.1
Cell line/tissue: H1
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BIW
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.09e-02 -2.37e-05 -6.77e-05 -2.06e-05 0.00e+00 0.00e+00 0.00e+00 -6.84e-05 ]
C [ 2.38e-05 1.69e-02 1.85e-05 1.61e-05 5.64e-02 7.05e-02 4.75e-05 8.62e-04 ]
G [ 3.23e-03 1.36e-03 3.05e-05 2.86e-05 7.83e-07 0.00e+00 4.96e-02 2.32e-02 ]
T [ -6.81e-04 1.07e-04 3.28e-02 4.59e-02 2.24e-07 0.00e+00 -3.52e-04 -4.65e-04 ]

Frequency matrix

A [ 9269 2781 3007 1490 56 0 25 1284 ]
C [ 4524 11199 2342 3745 28137 28399 604 5169 ]
G [ 11266 8889 6496 5471 74 3 25032 19857 ]
T [ 3343 5533 16557 17696 135 0 2741 2092 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000852.1 GABPA ENCSR290MUH K562 Homo sapiens
BP001058.1 GABPA ENCSR000BHS HeLa-S3 Homo sapiens
BP001108.1 GABPA ENCSR000BPY A549 Homo sapiens
Showing 3 profiles of page 2 from 2 pages