This page shows detailed deep learning-derived predictions and motifs for CTCF in fibroblast of lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000194.1 |
| Cell line/tissue: | fibroblast of lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DVA |
| Model: | BPNet |
| A [ | -2.39e-03 | -1.26e-03 | 1.92e-02 | -1.85e-03 | -4.78e-03 | 7.19e-02 | -4.48e-04 | 1.18e-02 | -5.11e-03 | -1.13e-03 | -2.06e-03 | -2.80e-03 | 4.58e-03 | -3.40e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.05e-02 | 1.63e-01 | -7.30e-05 | 5.39e-02 | 1.63e-02 | -3.82e-04 | -1.46e-04 | -2.19e-04 | -3.01e-04 | -5.09e-05 | 1.19e-03 | 6.99e-02 | 7.56e-04 | 2.88e-02 | ] |
| G [ | -1.66e-03 | -4.82e-04 | 6.50e-03 | 1.22e-02 | -2.21e-03 | 1.20e-03 | 1.67e-01 | 7.41e-02 | 5.48e-02 | 1.50e-01 | 9.62e-02 | 5.17e-04 | 4.78e-02 | 9.98e-03 | ] |
| T [ | -2.88e-03 | -7.26e-04 | -5.73e-03 | -2.32e-03 | 1.62e-02 | -2.56e-03 | -3.18e-04 | -7.95e-04 | 1.10e-03 | -9.45e-04 | -1.25e-03 | -3.29e-03 | -3.50e-03 | -1.12e-03 | ] |
| A [ | 5190 | 148 | 36326 | 3596 | 8798 | 44704 | 494 | 19633 | 4826 | 1184 | 2633 | 10157 | 20424 | 6605 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 42868 | 54992 | 2838 | 30360 | 21893 | 1652 | 121 | 690 | 2513 | 719 | 3960 | 36184 | 4661 | 25570 | ] |
| G [ | 3560 | 20 | 6939 | 19154 | 4601 | 5052 | 54248 | 33849 | 31093 | 52073 | 43671 | 3236 | 26041 | 16086 | ] |
| T [ | 3560 | 18 | 9075 | 2068 | 19886 | 3769 | 315 | 1006 | 16746 | 1202 | 4913 | 5601 | 4052 | 6918 | ] |
