Detailed information of deep learning profile BP000197.1

This page shows detailed deep learning-derived predictions and motifs for MYC in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000197.1
Cell line/tissue: A549
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0147.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01108  
Source: ENCSR000DYC
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.35e-05 -1.25e-05 2.51e-02 -3.83e-06 3.35e-05 -4.24e-04 -1.77e-06 -2.62e-04 ]
C [ 3.45e-03 3.90e-02 2.98e-05 4.19e-02 3.19e-06 4.66e-03 1.00e-04 7.82e-04 ]
G [ 4.52e-03 2.45e-05 1.38e-03 2.82e-06 4.36e-02 1.63e-05 3.34e-02 7.97e-03 ]
T [ -4.98e-04 4.83e-06 -3.66e-05 9.65e-05 0.00e+00 1.63e-02 -8.89e-05 -1.10e-04 ]

Frequency matrix

A [ 4030 615 15269 0 12 3331 1736 4128 ]
C [ 10375 31465 4235 32268 0 16939 5419 10438 ]
G [ 14046 87 10140 0 32256 2545 21297 12479 ]
T [ 3817 101 2624 0 0 9454 3816 5223 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000821.1 MYC ENCSR000EZU K562 Homo sapiens
BP000861.1 MYC ENCSR000EGJ K562 Homo sapiens
BP000959.1 MYC ENCSR000DMM MCF-7 Homo sapiens
BP000963.1 MYC ENCSR000FAZ K562 Homo sapiens
BP001062.1 MYC ENCSR000DOS MCF 10A Homo sapiens
BP001117.1 MYC ENCSR000FAG K562 Homo sapiens
BP001176.1 MYC ENCSR000EZD HeLa-S3 Homo sapiens
BP001187.1 MYC ENCSR000EBY H1 Homo sapiens
Showing 8 profiles of page 2 from 2 pages