This page shows detailed deep learning-derived predictions and motifs for CTCF in spleen using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000200.1 |
| Cell line/tissue: | spleen |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR266CJT |
| Model: | BPNet |
| A [ | -9.68e-04 | -2.00e-03 | -2.44e-03 | -5.11e-04 | -2.94e-04 | 3.82e-03 | -2.25e-04 | -1.47e-04 | -1.51e-03 | 1.34e-02 | -1.20e-03 | -3.32e-03 | -2.82e-04 | -1.78e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.68e-03 | 4.64e-02 | -1.85e-04 | 8.86e-02 | 1.32e-01 | 4.12e-02 | 5.53e-02 | 1.32e-01 | 1.03e-04 | -1.91e-03 | 7.67e-03 | 6.45e-03 | -9.36e-05 | -1.33e-03 | ] |
| G [ | 2.32e-02 | -6.61e-04 | 7.42e-02 | 8.89e-05 | -4.72e-05 | -1.53e-04 | -1.54e-05 | -4.64e-05 | -1.97e-04 | 1.31e-02 | 5.31e-02 | -6.31e-04 | 1.41e-01 | 7.87e-02 | ] |
| T [ | -2.38e-03 | 8.48e-03 | -1.97e-03 | -9.50e-04 | -4.66e-04 | -2.00e-03 | 1.71e-02 | -2.34e-04 | 6.62e-02 | -4.28e-03 | -1.22e-03 | 2.46e-02 | -3.18e-04 | -1.84e-03 | ] |
| A [ | 1751 | 868 | 1554 | 1596 | 106 | 7370 | 143 | 68 | 807 | 7349 | 501 | 2263 | 18 | 1053 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6692 | 10492 | 596 | 17928 | 20383 | 11787 | 12200 | 20491 | 1275 | 1573 | 6633 | 3121 | 10 | 1014 | ] |
| G [ | 10301 | 875 | 15930 | 707 | 39 | 700 | 130 | 30 | 639 | 8799 | 12690 | 616 | 20642 | 16988 | ] |
| T [ | 1961 | 8470 | 2625 | 474 | 177 | 848 | 8232 | 116 | 17984 | 2984 | 881 | 14706 | 35 | 1650 | ] |
