This page shows detailed deep learning-derived predictions and motifs for CTCF in esophagus squamous epithelium using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000201.1 |
| Cell line/tissue: | esophagus squamous epithelium |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR773JBP |
| Model: | BPNet |
| A [ | -8.48e-04 | -2.19e-03 | -2.36e-03 | -5.67e-04 | -3.46e-04 | 4.81e-03 | -3.58e-04 | -2.06e-04 | -1.70e-03 | 1.55e-02 | -1.46e-03 | -3.86e-03 | -3.62e-04 | -2.13e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.07e-02 | 3.97e-02 | -2.38e-04 | 8.06e-02 | 1.27e-01 | 3.71e-02 | 5.32e-02 | 1.43e-01 | 1.92e-04 | -1.57e-03 | 1.16e-02 | 5.39e-03 | -1.68e-04 | -1.48e-03 | ] |
| G [ | 2.25e-02 | 3.70e-05 | 6.69e-02 | 2.37e-04 | -4.37e-05 | 5.67e-05 | -5.31e-05 | -4.61e-05 | -1.19e-04 | 1.20e-02 | 4.96e-02 | -7.38e-04 | 1.42e-01 | 7.51e-02 | ] |
| T [ | -2.35e-03 | 7.06e-03 | -2.17e-03 | -1.01e-03 | -5.53e-04 | -2.48e-03 | 1.51e-02 | -2.76e-04 | 6.30e-02 | -4.08e-03 | -1.45e-03 | 2.32e-02 | -4.01e-04 | -1.23e-03 | ] |
| A [ | 3879 | 2124 | 3408 | 2987 | 372 | 12953 | 530 | 142 | 2319 | 13111 | 1109 | 5311 | 21 | 2223 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11883 | 18917 | 1754 | 31607 | 37059 | 20703 | 23026 | 37544 | 3141 | 3357 | 13092 | 5795 | 24 | 2375 | ] |
| G [ | 18284 | 2416 | 27227 | 2110 | 194 | 2027 | 540 | 86 | 1410 | 15713 | 21780 | 1826 | 37908 | 30167 | ] |
| T [ | 4016 | 14606 | 5673 | 1358 | 437 | 2379 | 13966 | 290 | 31191 | 5882 | 2081 | 25130 | 109 | 3297 | ] |
